Haloarchaea

Halobacteria (bentuk jamak dari kata "halobacterium") beralih ke halaman ini. Untuk genus, lihat halobacterium.

Haloarchaea

Halobacterium sp. strain NRC-1, setiap sel panjangnya sekitar 5 µm.
Klasifikasi ilmiah
Domain:	Archaea
Kerajaan:	Archaea
Filum:	Euryarchaeota
Kelas:	Halobacteria
Ordo
Halobacteriales
Sinonim
Halobacteria Grant et al. 2002

Dalam taksonomi, Halobacteria (juga Halomebacteria) adalah kelas dari Euryarchaeota,^[1] yang ditemukan dalam air jenuh atau hampir jenuh dengan garam. Halobacteria sekarang diakui sebagai arkea, bukan bakteri. Nama 'halobacteria' diberikan untuk kelompok organisme sebelum adanya domain Archaea disadari, dan tetap berlaku sesuai dengan aturan taksonomi^{[butuh rujukan]}. Dalam konteks non-taksonomi, arkea halofilik disebut sebagai haloarchaea untuk membedakan mereka dari bakteri halofilik.

Taksonomi

Domain: Archaea

Phylum: Euryarchaeota

Class: Halobacteria
- Order: Halobacteriales
  - Family: Halobacteriaceae
    - Haladaptatus [Hap.]
      - Haladaptatus cibarius
      - Haladaptatus litoreus
      - Haladaptatus pallidirubidus
      - Haladaptatus paucihalophilus (Type species)
    - Halalkalicoccus [Hac.]
      - Halalkalicoccus jeotgali
      - Halalkalicoccus tibetensis (Type species)
      - Halalkalicoccus paucihalophilus
    - Halapricum [Hpr.]
      - Halapricum salinum (Type species)
    - Halarchaeum [Hla.]
      - Halarchaeum acidiphilum (Type species)
      - Halarchaeum nitratireducens
      - Halarchaeum rubridurum
      - Halarchaeum salinam
      - Halarchaeum solikamskense
    - Haloarchaeobius [Hab.]
      - Haloarchaeobius iranensis (Type species)
      - Haloarchaeobius litoreus
      - "Haloarchaeobius salinus" (IJSEM, in press)
    - Haloarcula [Har.]
      - Haloarcula amylolytica
      - Haloarcula argentinensis
      - Haloarcula hispanica
      - Haloarcula japonica
      - Haloarcula marismortui
      - Haloarcula quadrata
      - Haloarcula salaria
      - Haloarcula tradensis
      - Haloarcula vallismortis (Type species)
    - Halobacterium [Hbt.] (Type genus)
      - Halobacterium jilantaiense
      - Halobacterium noricense
      - "Halobacterium piscisalsi" (subjective junior synonym of Halobacterium salinarum)^[2]
      - Halobacterium ruburm
      - Halobacterium salinarum (Type species)
    - Halobaculum [Hbl.]
      - Halobaculum gomorrense (Type species)
      - Halobaculum magnesiiphilum
    - Halobellus [Hbs.]
      - Halobellus clavatus (Type species)
      - Halobellus inordinatus
      - Halobellus limi
      - Halobellus litoreus
      - Halobellus salinus
      - Halobellus rarus
      - Halobellus rufus
    - Halobiforma [Hbf.]
      - Halobiforma haloterrestris (Type species)
      - Halobiforma lacisalsi
      - Halobiforma nitratireducens
    - "Halocalculus" [Hcl.]
      - "Halocalculus aciditolerans " (Type species) (IJSEM, in press)
    - Halococcus [Hcc.]
      - "Halococcus agarilyticus" (IJSEM, in press)
      - Halococcus dombrowskii
      - Halococcus hamelinensis
      - Halococcus morrhuae (Type species)
      - Halococcus qingdaonensis
      - Halococcus saccharolyticus
      - Halococcus salifodinae
      - Halococcus sediminicola
      - Halococcus thailandensis
    - Haloferax [Hfx.]
      - Haloferax alexandrinus
      - Haloferax chudinovii
      - Haloferax denitrificans
      - Haloferax elongans
      - Haloferax gibbonsii
      - Haloferax larsenii
      - Haloferax lucentense
      - Haloferax mediterranei
      - Haloferax mucosum
      - Haloferax prahovense
      - Haloferax sulfurifontis
      - Haloferax volcanii (Type species)
    - Halogeometricum [Hgm.]^[3]
      - Halogeometricum borinquense (Type species)
      - Halogeometricum limi
      - Halogeometricum pallidum
      - Halogeometricum rufum
    - Halogranum [Hgn.]
      - Halogranum amylolyticum
      - Halogranum gelatinilyticum
      - Halogranum rubrum (Type species)
      - Halogranum salarium
    - Halohasta [Hht.]
      - Halohasta litorea (Type species)
      - Halohasta litchfieldiae
    - Halolamina [Hlm.]
      - Halolamina pelagica (Type species)
      - Halolamina rubra
      - Halolamina salifodinae
      - Halolamina salina
      - "Halolamina sediminis" (IJSEM, in press)
    - Halomarina [Hmr.]
      - Halomarina oriensis (Type species)
    - Halomicroarcula [Hma.]
      - Halomicroarcula limicola
      - Halomicroarcula pellucida (Type species)
      - "Halomicroarcula salina" (IJSEM, in press)
    - Halomicrobium [Hmc.]
      - Halomicrobium katesii
      - Halomicrobium mukohataei (Type species)
      - Halomicrobium zhouii
    - Halonotius [Hns.]
      - Halonotius pteroides (Type species)
    - Halopelagius [Hpl.]
      - Halopelagius inordinatus (Type species)
      - Halopelagius fulvigenes
      - Halopelagius longus
    - Halopenitus [Hpt.]
      - Halopenitus salinus
      - Halopenitus malekzadehii
      - Halopenitus persicus (Type species)
    - Halopiger [Hpg.]
      - Halopiger aswanensis
      - Halopiger salifodinae
      - Halopiger xanaduensis (Type species)
    - Haloplanus [Hpn.]
      - Haloplanus aerogenes
      - Haloplanus litoreus
      - Haloplanus natans (Type species)
      - Haloplanus ruber
      - Haloplanus salinus
      - Haloplanus vescus
    - Haloquadratum [Hqr.]
      - Haloquadratum walsbyi (Type species)
    - Halorhabdus [Hrd.]
      - Halorhabdus tiamatea
      - Halorhabdus utahensis (Type species)
    - Halorientalis [Hos.]
      - Halorientalis persicus
      - Halorientalis regularis (Type species)
    - Halorubellus [Hrb.]
      - Halorubellus litoreus
      - Halorubellus salinus (Type species)
    - Halorubrum [Hrr.]
      - Halorubrum aquaticum
      - Halorubrum aidingense
      - Halorubrum alkaliphilum
      - Halorubrum arcis
      - Halorubrum californiense
      - Halorubrum chaoviator
      - Halorubrum cibi
      - Halorubrum coriense
      - Halorubrum distributum
      - Halorubrum ejinorense
      - Halorubrum ezzemoulense
      - Halorubrum halophilum
      - Halorubrum lacusprofundi
      - "Halorubrum laminariae" (Antonie Van Leeuwenhoek, 2015, 107:217-223)
      - Halorubrum lipolyticum
      - Halorubrum litoreum
      - Halorubrum luteum
      - Halorubrum orientale
      - "Halorubrum persicum" (IJSEM, in press)
      - Halorubrum rubrum
      - Halorubrum saccharovorum (Type species)
      - Halorubrum salinum
      - Halorubrum sodomense
      - Halorubrum tebenquichense
      - Halorubrum terrestre
      - Halorubrum tibetense
      - Halorubrum trapanicum
      - Halorubrum vacuolatum
      - Halorubrum xinjiangense
    - Halorussus [Hrs.]
      - Halorussus rarus
      - "Halorussus ruber" (Arch Microbiol, 2015, 197:91-95)
    - Halosimplex [Hsx.]
      - Halosimplex carlsbadense (Type species)
      - Halosimplex pelagicum
      - Halosimplex rubrum
    - Halostagnicola [Hst.]
      - Halostagnicola alkaliphila
      - Halostagnicola bangensis
      - Halostagnicola kamekurae
      - Halostagnicola larsenii (Type species)
    - Haloterrigena [Htg.]
      - Haloterrigena daqingensis
      - Haloterrigena hispanica
      - Haloterrigena jeotgali
      - Haloterrigena limicola
      - Haloterrigena longa
      - Haloterrigena saccharevitans
      - Haloterrigena salina
      - Haloterrigena thermotolerans
      - Haloterrigena turkmenica (Type species)
    - "Halovarius" ["Hvr".]
      - "Halovarius luteus" (Type species) (IJSEM, in press)
    - Halovenus [Hvn.]
      - Halovenus aranensis (Type species)
      - "Halovenus rubra" (Curr Microbiol, 2015, 70:91-95)
    - Halovivax [Hvx.]
      - Halovivax asiaticus (Type species)
      - "Halovivax limisalsi" (IJSEM, in press)
      - Halovivax ruber
    - Natrialba [Nab.]
      - Natrialba aegyptia
      - Natrialba asiatica (Type species)
      - Natrialba chahannaoensis
      - Natrialba hulunbeirensis
      - Natrialba magadii
      - Natrialba taiwanensis
    - Natribaculum [Nbl.]
      - Natribaculum breve (Type species)
      - Natribaculum longum
    - Natrinema [Nnm.]
      - Natrinema altunense
      - Natrinema ejinorense
      - Natrinema gari
      - Natrinema pallidum
      - Natrinema pellirubrum (Type species)
      - Natrinema salaciae
      - Natrinema versiforme
    - Natronoarchaeum [Nac.]
      - Natronoarchaeum mannanilyticum (Type species)
      - Natronoarchaeum philippinense
      - Natronoarchaeum rubrum
    - Natronobacterium [Nbt.]
      - Natronobacterium gregoryi (Type species)
      - Natronobacterium texcoconense
    - Natronococcus [Ncc.]
      - Natronococcus amylolyticus
      - Natronococcus jeotgali
      - Natronococcus occultus (Type species)
      - Natronococcus roseus
    - Natronolimnobius [Nln.]
      - Natronolimnobius baerhuensis (Type species)
      - Natronolimnobius innermongolicus
    - Natronomonas [Nmn.]
      - Natronomonas gomsonensis
      - Natronomonas moolapensis
      - Natronomonas pharaonis (Type species)
    - Natronorubrum [Nrr.]
      - Natronorubrum aibiense
      - Natronorubrum bangense (Type species)
      - Natronorubrum sediminis
      - Natronorubrum sulfidifaciens
      - Natronorubrum texcoconense
      - Natronorubrum tibetense
    - Salarchaeum [Sar.]
      - Salarchaeum japonicum (Type species)
    - Salinarchaeum [Saa.]
      - Salinarchaeum laminariae (Type species)
    - Salinigranum [Sgn.]
      - Salinigranum rubrum (Type species)
    - "Salinirubrum" ["Srr".]
      - Salinirubrum litoreum (Type species)

Referensi

↑ See the NCBI webpage on Halobacteria Diarsipkan 2022-08-02 di Wayback Machine. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Diarsipkan dari versi aslinya tanggal 2019-01-24. Diakses tanggal 2007-03-19.
↑ Minegishi, H., Echigo, A., Shimane, Y., Kamekura, M., Tanasupawat, S., Visessanguan, W., Usami, R. (2012) "Halobacterium piscisalsi Yachai et al. 2008 is later heterotypic synonym of Halobacterium salinarum Elazari-Volcani 1957." Int J Syst Evol Microbiol. 62: 2160-2162
↑ Qiu, X.X., Zhao, M.L., Han, D., Zhang, W.J., Dyall-Smith, M.L., Cui, H.L. (2013) "Taxonomic study of the genera Halogeometricum and Halosarcina: transfer of Halosarcina limi and Halosarcina pallida to the genus Halogeometricum as Halogeometricum limi comb. nov. and Halogeometricum pallidum comb. nov., respectively." Int J Syst Evol Microbiol. 63: 3915-3919

Bacaan lebih lanjut

Jurnal ilmiah

Soppa J (Maret 2006). "From genomes to function: haloarchaea as model organisms". Microbiology (Reading, Engl.). 152 (Pt 3): 585–90. doi:10.1099/mic.0.28504-0. PMID 16514139.{{cite journal}}: Pemeliharaan CS1: DOI bebas tanpa ditandai (link) Pemeliharaan CS1: Tanggal diterjemahkan otomatis (link)
Cavalier-Smith, T (2002). "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification". Int. J. Syst. Evol. Microbiol. 52 (Pt 1): 7–76. PMID 11837318.
Woese, CR; Kandler O; Wheelis ML (1990). "Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya". Proc. Natl. Acad. Sci. USA. 87 (12): 4576–4579. Bibcode:1990PNAS...87.4576W. doi:10.1073/pnas.87.12.4576. PMC 54159. PMID 2112744.
Cavalier-Smith, T (1986). "The kingdoms of organisms". Nature. 324 (6096): 416–417. Bibcode:1986Natur.324..416C. doi:10.1038/324416a0. PMID 2431320.

Buku ilmiah

Grant WD, Kamekura M, McGenity TJ, Ventosa A (2001). "Class III. Halobacteria class. nov.". Dalam DR Boone and RW Castenholz, eds. (ed.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (Edisi 2nd). New York: Springer Verlag. hlm. 169. ISBN 978-0-387-98771-2.{{cite book}}: |editor= memiliki nama generikPemeliharaan CS1: Banyak nama: daftar penulis (link)
Garrity GM, Holt JG (2001). "Phylum AII. Euryarchaeota phy. nov.". Dalam DR Boone and RW Castenholz, eds. (ed.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (Edisi 2nd). New York: Springer Verlag. hlm. 169. ISBN 978-0-387-98771-2.{{cite book}}: |editor= memiliki nama generik

Database ilmiah

Referensi PubMed untuk Halobacteria
Referensi PubMed Central untuk Halobacteria
Referensi Google Scholar untuk Halobacteria

Pranala luar

NCBI taxonomy page for Halobacteria
Search Tree of Life taxonomy pages for Halobacteria
Search Species2000 page for Halobacteria
MicrobeWiki page for Halobacteria
LSPN page for Halobacteria
An educational website on haloarchaea Diarsipkan 2014-10-14 di Wayback Machine
HaloArchaea.com Diarsipkan 2019-11-24 di Wayback Machine
Mike Dyall-Smith's Homepage Diarsipkan 2008-03-19 di Wayback Machine

Klasifikasi Prokariota: Arkea

Domain: Arkea; Bakteria; Eukaryota
(Kerajaan: Tumbuhan; Hacrobia; Heterokontophyta; Alveolata; Rhizaria; Excavata; Amoebozoa; Hewan; Fungi)

Euryarchaeota

Archaeoglobi	Archaeoglobales
Halobacteria	Halobacteriales
Methanobacteria	Methanobacteriales
Methanococci	Methanococcales
Methanomicrobia	Methanocellales Methanomicrobiales Methanosarcinales
Methanopyri	Methanopyrales
Thermococci	Thermococcales
Thermoplasmata	Thermoplasmatales

Crenarchaeota

Thermoprotei	Acidilobales Desulfurococcales Fervidicoccales Sulfolobales Thermoproteales

Thaumarchaeota

Nitrososphaeria	Cenarchaeales Nitrosopumilales Nitrososphaerales

Korarchaeota

"Ca. Korarchaeum cryptofilum"

Nanoarchaeota

Nanoarchaeum

Aigarchaeota

"Ca. Caldiarchaeum subterraneum"

Lokiarchaeota

"Ca. Lokiarchaeum"

Pengidentifikasi takson
Halobacteria	Wikidata: Q1054206 Wikispecies: Halobacteria CoL: C7 EoL: 7949 GBIF (old): 160 iNaturalist: 152089 IRMNG: 1396 ITIS: 951427 LPSN: halobacteria NCBI: 183963 Open Tree of Life: 921404 SeqCode Registry: 8694 WoRMS: 416243

Taksonomi

Referensi